Artem N.

молекулярный биолог, менеджер проектов, биоинформатик

Постоянно открыт для предложений, воплощения и созидания новых идей!

Последнее обновление резюме 11.03.2024
Адрес Санкт-Петербург, Russian Federation
Электронная почта Заблокировано
Телефон Заблокировано
Соцсеть или сайт Заблокировано

Опыт

BMC Genomics
Senior Editorial Board Member
Мар 2024 - Текущий
European University at St.-Petersburg
Head Of Laboratory
Ноя 2021 - Текущий
BMC Genomics
Editorial Board Member
Янв 2021 - Апр 2024
Nord University
Researcher
Ноя 2018 - Янв 2022
Kurchatov Institute
Head Of Laboratory
Июн 2015 - Ноя 2018
Kurchatov Institute
Deputy Head Of Laboratory
Мар 2015 - Июн 2015
Kurchatov Institute
PostDoc
Май 2009 - Мар 2015
Russian Academy of Sciences, Centre for Bioengineering RAS
PhD Student
Июл 2005 - Дек 2008

В чем вы сильны?

PCR, Next-generation sequencing, RNA-seq, microRNA-seq, ancient DNA, statistics, population genetics, genomics, bioinformatics (RNA-seq analysis, genome de novo assembly), sampling, aquaculture

Расскажите о себе что-нибудь еще: публикации, конференции, хобби

  1. Skjærven K.H., Alix M., Kleppe L., Fernandes J.M.O., Whatmore P., Nedoluzhko A., Andersson E., Kjesbu O.S.: Ocean warming shapes embryonic developmental prospects of the next generation in Atlantic cod // ICES Journal of Marine Science. 2024. fsae025. https://doi.org/10.1093/icesjms/fsae025.
  2. Montero D., Torrecillas S., Serradell A., Nedoluzhko A., Fernández-Montero Á., Makol A., Monzón-Atienza L., Valdenegro V., Sanahuja I., Galindo-Villegas J., Acosta F.: Phytogenics enhance welfare and vaccine efficacy against Vibrio anguillarum in European seabass (Dicentrarchus labrax) juveniles. Aquaculture. 2024. V.585. 740714. https://doi.org/10.1016/j.aquaculture.2024.740714..
  3. Sharko F.S., Boulygina E.S., Tsygankova S.V., Slobodova N.V., Rastorguev S.M., Krasivskaya A.A., Belinsky A.B., Härke H., Kadieva A.A., Demidenko S.V., Malashev V.Y., Shvedchikova T.Y., Dobrovolskaya M.V., Reshetova I.K., Korobov D.S., Nedoluzhko A.V.: Koban culture genome-wide and archeological data open the bridge between Bronze and Iron Ages in the North Caucasus // Eur J Hum Genet. 2024. https://doi.org/10.1038/s41431-023-01524-4.
  4. Чепрасов М.Ю., Боескоров Г.Г., Новгородов Г.П., Тихонов А.Н., Григорьева Л.В., Булыгина Е.С., Слободова Н.В., Шарко Ф.С., Протопопов А.В., Недолужко А.В.: Среднеголоценовый бурый медведь (Ursus arctos) с острова Большой Ляховский (Новосибирские острова) // Доклады Академии Наук. 2023. Т. 513. № 1. С. 533-538. https://doi.org/10.1134/S0012496623700692.
  5. Fernandes J.M.O., Nedoluzhko A.V., Konstantinidis I. Gavaia P.: Epigenetics in Fish Growth. In Epigenetics in Aquaculture (eds F. Piferrer and H.-P. Wang). 2023. pp. 237-258. https://doi.org/10.1002/9781119821946.ch9.
  6. Chen N., Nedoluzhko A.: Ancient DNA: the past for the future // BMC Genomics. 2023. V.24. 309. https://doi.org/10.1186/s12864-023-09396-0
  7. Nedoluzhko A.: Sea of opportunities: marine genomics in an era of global environmental change // BMC Genomics. 2023. V.24. 286. https://doi.org/10.1186/s12864-023-09392-4.
  8. Sharko F., Rbbani G., Siriyappagouder P., Raeymaekers J.A.M., Galindo-Villegas J., Nedoluzhko A., Fernandes J.M.O.: CircPrime: a web-based platform for design of specific circular RNA primers // BMC Bioinformatics. 2023. V.24. 205. https://doi.org/10.1186/s12859-023-05331-y.
  9. Коробов Д.С., Булыгина Е.C., Слободова Н.В., Шарко Ф.С., Недолужко А.В.: Генетическое разнообразие жителей Центрального Предкавказья в I тыс. до н.э. – I тыс. н.э. по данным митохондриальной ДНК // Российская археология. 2023. №1. С. 53 - 69. doi:10.31857/S0869606323010129. 
  10. Sharko F., Slobodova N., Boulygina E., Cheprasov, M., Gladysheva-Azgari M., Tsygankova S., Rastorguev S., Novgorodov G., Boeskorov G., Grigorieva L., Hwang W.S., Tikhonov A., Nedoluzhko A.: Ancient DNA of the Don-Hares Assumes the Existence of Two Distinct Mitochondrial Clades in Northeast Asia // Genes. 2023 14. 700. https://doi.org/10.3390/genes14030700

  11. Rbbani G., Nedoluzhko A., Siriyappagouder P., Sharko F., Galindo-Villegas J., Raeymaekers J.A.M., Joshi R., Fernandes J.M.O.: The novel circular RNA CircMef2c is positively associated with muscle growth in Nile tilapia // Genomics. 2023. 110598. https://doi.org/10.1016/j.ygeno.2023.110598.

  12. Boulygina E., Sharko F., Cheprasov M., Gladysheva-Azgari M., Slobodova N., Tsygankova S., Rastorguev S., Grigorieva L., Kopp M., Hwang W.-S., Novgorodov G., Boeskorov G., Protopopov A., Fernandes J.M.O., Tikhonov A., Nedoluzhko A.: Ancient DNA Reveals Maternal Philopatry of the Northeast Eurasian Brown Bear (Ursus arctos) Population during the Holocene // Genes. 2022. V.13(11). 1961; https://doi.org/10.3390/genes13111961

  13. Nedoluzhko A., Orlova S.Y., Kurnosov D.S., Orlov A.M., Galindo-Villegas J., Rastorguev S.M.: Genomic Signatures of Freshwater Adaptation in Pacific Herring (Clupea pallasii) // Genes. 2022. V.13 (10). 1856. https://doi.org/10.3390/genes13101856. 

  14. Charlie-Silva I., Martins Feitosa N., De Pontes L., Fernandes B.H., Nóbrega R.H., Gomes J.M., Prata M.N., Ferraris F.K., Melo D.C., Conde G., Rodrigues L.F., Aracati M.F., Corrêa-Junior J.D., Manrique W.G., Superio J., Garcez A.S., Conceição K., Yoshimura T.M., Nunez S.C., Eto S.F., Fernandes D.C., Freitas A.Z., Ribeiro M.S., Nedoluzhko A., Lopes-Ferreira M., Borra R.C., Barcellos L.J., Perez A., Malafaia G., Cunha T.M., Belo M., Galindo-Villegas J.: Plasma Proteome Responses in Zebrafish Following λ-Carrageenan-Induced Inflammation are Mediated by PMN Leukocytes and Correlate Highly with their Human Counterparts // Frontiers in Immunology. 2022. V. 13. 1019201. https://doi.org/10.3389/fimmu.2022.1019201.
  15. Nedoluzhko A., Sharko F., Tsygankova S., Boulygina E., Slobodova N., Teslyuk A., Galindo-Villegas J., Rastorguev S.: Intergeneric Hybridization of Two Stickleback Species Leads to Introgression of Membrane-Associated Genes and Invasive TE Expansion. Frontiers in Genetics. 2022. doi: 10.3389/fgene.2022.863547.

  16. Sharko F.S., Rastorguev S.M., Tikhonov A.N., Nedoluzhko A.V.: Reply to: “Steller’s sea cow uncertain history illustrates importance of ecological context when interpreting demographic histories from genomes”. Nature Communications. 2022. V. 13. 3672. doi:10.1038/s41467-022-31382-5.

  17. Levin B., Simonov E., Gabrielyan B.K., Mayden R.L., Rastorguev S.M., Roubenyan H.R., Sharko F.S., Nedoluzhko A.V.: Caucasian treasure: genomics sheds light on the evolution of half-extinct Sevan trout, Salmo ischchan, species flock // Molecular Phylogenetics and Evolution. 2021. V.167. 107346. doi:10.1016/j.ympev.2021.107346.

  18. Orlova S.Y., Rastorguev S., Bagno T., Kurnosov D., Nedoluzhko A.: Genetic structure of marine and lake forms of Pacific herring Clupea pallasii // PeerJ. 2021. V. 9. e12444. doi:10.7717/peerj.12444.
  19. Erlikh V.R., Gak E.I., Kleshchenko A.A., Sharko F.S., Boulygina E.S., Tsygankova S.V., Slobodova N.V., Rastorguev S.M., Nedoluzhko A., Godizov G.L., Chandrasekaran S.: Potential maternal kinship among humans from the Northern Caucasus “post-dolmen” burials // Journal of Archaeological Science: Reports. 2021. V.39. 103198. doi:10.1016/j.jasrep.2021.103198. 
  20. Abdelhafiz Y.A., Fernandes J.M.O., Larger S., Albanese D., Donati C., Jafari O., Nedoluzhko A.V., Kiron V.: Breeding strategy shapes the composition of bacterial communities in female Nile tilapia reared in a recirculating aquaculture system // Frontiers in Microbiology. 2021. V.12. 709611. doi:10.3389/fmicb.2021.709611.
  21. Sharko F., Gladysheva-Azgari M., Tsygankova S., Mitrofanova I., Boulygina E., Slobodova N., Smykov A., Rastorguev S., Nedoluzhko A.: The complete chloroplast genome sequence of cultivated Prunus persica cv. ‘Sovetskiy’ // Mitochondrial DNA Part B. 2021. V.6(10). P. 2882-2883. doi:10.1080/23802359.2021.19728.
  22. Nedoluzhko A., Mjelle R., Renström M., Skjærven K.H., Piferrer F., Fernandes J.M.O.: The first mitochondrial 5-methylcytosine map in a non-model teleost (Oreochromis niloticus) reveals extensive strand-specific and non-CpG methylation // Genomics. 2021. V.113(5). P.3050-3057. doi: 10.1016/j.ygeno.2021.07.007. 
  23. Konstantinidis I., Anastasiadi D., Sætrom P., Nedoluzhko A.V., Mjelle R., Podgorniak T., Piferrer F., Fernandes J.M.O.: Epigenetic mapping of the somatotropic axis in Nile tilapia reveals differential DNA hydroxymethylation marks associated with growth // Genomics. 2021. 113(5). P.2953-2964. doi:10.1016/j.ygeno.2021.06.037.
  24. Rbbani G., Nedoluzhko A., Galindo-Villegas J., Fernandes J.M.O.: Function of Circular RNAs in Fish and Their Potential Application as Biomarkers // International Journal of Molecular Sciences. 2021. 22. 7119. doi:10.3390/ijms22137119
  25. Shalgimbayeva G., Volkov A., Slobodova N., Sharko F., Tsygankova S., Boulygina E., Nguyen V.Q., Pham T.T., Nguyen D.T., Assylbekova S.Z., Alekseev Y., Nedoluzhko A., Fernandes J.M.O., Rastorguev S.: Genetic Investigation of Aral Wild Common Carp Populations (Cyprinus carpio) Using ddRAD Sequencing // Diversity. 2021. V. 13 (7). 295. doi:10.3390/d13070295.
  26. Nedoluzhko A.V., Gladysheva-Azgari M.V., Shalgimbayeva G.M., Volkov A.A., Slobodova N.V., Tsygankova S.V., Boulygina E.S., Nguyen V.Q., Pham T.T., Nguyen D.T., Sharko F.S., Rastorguev S.M.: Genetic contribution of domestic European common carp (Cyprinus carpio carpio) and Amur carp (Cyprinus carpio haematopterus) to the wild Vietnamese carp population as revealed by ddRAD sequencing // Aquaculture. 2021. 737049. doi:10.1016/j.aquaculture.2021.737049.
  27. Spasskaya N.N., Pavlinov I.Ya., Sharko F.S., Boulygina E.S., Tsygankova S.V., Nedoluzhko A.V., Boeskorov G.G., Mashchenko E.N.: Morphometric and genetic analyses of diversity
    of the Lena horse (Equus lenensis Russanov, 1968; Mammalia: Equidae) // Russian J. Theriol. 2021. V. 20(1). P.82–95. doi:10.15298/rusjtheriol.20.1.09
  28. Sharko, F.S., Boulygina, E.S., Tsygankova, S.V., Slobodova N.V., Alekseev D.A., Krasivskaya A.A., Rastorguev S.M., Tikhonov A.N., Nedoluzhko A.V.: Steller’s sea cow genome suggests this species began going extinct before the arrival of Paleolithic humans // Nature Communications. 2021. 12. 2215. doi:10.1038/s41467-021-22567-5
  29. Nedoluzhko A., Sharko F., Tsygankova S., Boulygina E., Ibragimova A., Teslyuk A., Galindo-Villegas J., Rastorguev S.: Genomic evidence supports the introgression between two sympatric stickleback species inhabiting the White Sea basin // Heliyon. 2021. V. 7(2). e06160. doi: 10.1016/j.heliyon.2021.e06160.
  30. Nedoluzhko A., Gruzdeva N., Sharko F., Rastorguev S., Zakharova N., Kostyuk G., Ushakov V.: The Biomarker and Therapeutic Potential of Circular Rnas in Schizophrenia. Cells. 2020. 9. 2238.
  31. Nedoluzhko A.V., Slobodova N.V., Sharko F.S., Shalgimbayeva G.M., Tsygankova S.V., Boulygina E.S., Jeney Z., Nguyen V.Q., Pham T.T., Nguyen D.T., Volkov A.A., Fernandes J.M.O, Rastorguev S.M.: A new strain group of common carp: The genetic differences and admixture events between Cyprinus carpio breeds // Ecology and Evolution. 2020. doi: 10.1002/ece3.6286.
  32. Boulygina E., Tsygankova S., Sharko F., Slobodova N., Gruzdeva N., Rastorguev S., Belinsky A., Härke H., Kadieva A., Demidenko S., Shvedchikova T., Dobrovolskaya M., Reshetova I., Korobov D., Nedoluzhko A.: Mitochondrial and Y-chromosome diversity of the prehistoric Koban culture of the North Caucasus // Journal of Archaeological Science: Reports. 2020. Volume 31. 102357. doi: 10.1016/j.jasrep.2020.102357.
  33. Velichkovsky B., Nedoluzhko A., Goldberg E., Efimova O., Sharko F., Rastorguev S., Krasivskaya A., Sharaev M., Korosteleva A., Ushakov V.: New Insights into the Human Brain’s Cognitive Organization: Views from the Top, from the Bottom, from the Left and, particularly, from the Right // Procedia Computer Science. 2020. V. 169. P. 547-557. doi:10.1016/j.procs.2020.02.211.
  34. Ioannis Konstantinidis, Pål Sætrom, Robin Mjelle, Artem V. Nedoluzhko, Diego Robledo & Jorge M. O. Fernandes: Major gene expression changes and epigenetic remodelling in Nile tilapia muscle after just one generation of domestication // Epigenetics. 2020. doi:10.1080/15592294.2020.1748914
  35. Nedoluzhko A., Sharko F., Rbbani M.G., Teslyuk A., Konstantinidis I., Fernandes J.M.O.: CircParser: a novel streamlined pipeline for circular RNA structure and host gene prediction in non-model organisms // PeerJ. 2020. V. 8. e8757. doi: 10.7717/peerj.8757
  36. Nedoluzhko A.V., Sharko F.S., Tsygankova S.V., Boulygina E.S., Barmintseva A.E., Krasivskaya A.A., Ibragimova A.S., Gruzdeva N.M., Rastorguev S.M., Mugue N.S.: Molecular phylogeny of one extinct and two critically endangered Central Asian sturgeon species (genus Pseudoscaphirhynchus) based on their mitochondrial genomes // Scientific Reports. 2020. 10(1):722. doi: 10.1038/s41598-020-57581-y.
  37. Artem V. Nedoluzhko, Fedor S. Sharko, Eugenia S. Boulygina, Svetlana V. Tsygankova, Natalia V. Slobodova, Natalia M. Gruzdeva, Sergey M. Rastorguev, Natalia N. Spasskaya & Evgeny N. Maschenko: The complete mitochondrial genome of the extinct Pleistocene horse (Equus cf. lenensis) from Kotelny Island (New Siberian Islands, Russia) and its phylogenetic assessment // Mitochondrial DNA Part B. 2020. V. 5 (1). P. 243 - 245. 
  38. Sharko F.S., Nedoluzhko A.V., Lê B.M., Tsygankova S.V., Boulygina E.S., Rastorguev S.M., Sokolov A.S., Rodriguez F., Mazur A.M., Polilov A.A., Benton R., Evgen'ev M.B., Arkhipova I.R., Prokhortchouk E.B., Skryabin K.G.: A partial genome assembly of the miniature parasitoid wasp, Megaphragma amalphitanum // PLoS ONE. 2019. V. 14(12):e0226485. doi: 10.1371/journal.pone.0226485
  39. Sharko F.S., Boulygina E.S., Rastorguev S.M., Tsygankova S.V., Tomkovich P.S., Nedoluzhko A.V.: Phylogenetic position of the presumably extinct slender-billed curlew, Numenius tenuirostris // Mitochondrial DNA Part A. 2019. DOI: 10.1080/24701394.2019.1597862
  40. Sharko F.S., Rastorguev S.M., Boulygina E.S., Tsygankova S.V., Ibragimova A.S., Tikhonov A.N., Nedoluzhko A.V.: Molecular phylogeny of the extinct Steller's sea cow and other Sirenia species based on their complete mitochondrial genomes // Genomics. 2018. pii: S0888-7543(18)30475-0. doi: 10.1016/j.ygeno.2018.10.012
  41. Levin B.A., Rastorguev S.M., Simonov E., Boulygina E.S., Sharko F.S., Tsygankova S.V., Gabrielyan B.K., Roubenyan H.R., Mayden R.L., Nedoluzhko A.V.: High-throughput sequencing of the mitochondrial genomes from archived fish scales: an example of the extinct species flock of Sevan trout Salmo ischchan // Hydrobiologia. 2018. doi: 10.1007/s10750-018-3688-7
  42. Rastorguev S.M., Nedoluzhko A.V., Gruzdeva N.M., Boulygina E.S., Tsygankova S.V., Oshchepkov D.Y., Mazur A.M., Prokhortchouk E.B., Skryabin K.G.: Gene Expression in the Three-Spined Stickleback (Gasterosteus aculeatus) of Marine and Freshwater Ecotypes // Acta Naturae. 2018. V. 10(1). P. 66-74.
  43. Nedoluzhko A.V., Rastorguev S.M., Simonov E., Boulygina E.S., Sharko F.S., Tsygankova S.V., Nguyen V.Q. Gabrielyan B.K., Roubenyan H.R., Levin B.A.: Sequencing of two mitochondrial genomes of endangered form of the Sevan trout Salmo ischchan aestivalis // Mitochondrial DNA Part B. V. 3(2). P. 469-471. https://doi.org/10.1080/23802359.2018.1462120
  44. Nedoluzhko A.V., Rastorguev S.M., Simonov E., Boulygina E.S., Sharko F.S., Tsygankova S.V., Gabrielyan B.K., Roubenyan H.R., Levin B.A.: Two complete mitochondrial genomes of extinct form of the Sevan trout Salmo ischchan danilewskii // Mitochondrial DNA Part B. 2018. V. 3 (1)  https://doi.org/10.1080/23802359.2017.1419096.
  45. Sorokin M., Kholodenko R., Grekhova A., Suntsova M., Pustovalova M., Vorobyeva N., Kholodenko I., Malakhova G., Garazha A., Nedoluzhko A., Vasilov R., Poddubskaya E., Kovalchuk O., Adamyan L., Prassolov V., Allina D., Kuzmin D., Ignatev K., Osipov A., Buzdin A.: Acquired resistance to tyrosine kinase inhibitors may be linked with the decreased sensitivity to X-ray irradiation. Oncotarget. 2017. V. 9:5111-5124. https://doi.org/10.18632/oncotarget.23700
  46. Rastorguev S., Nedoluzhko A., Gruzdeva N., Boulygina E., Sharko F., Ibragimova A., Tsygankova S., Artemov A., Skryabin K., Prokhortchouk E.: Differential miRNA expression in the three-spined stickleback, response to environmental changes // Scientific Reports. 2017. V. 7(1):18089. doi: 10.1038/s41598-017-18128-w.
  47. I.A. Dolina, O.I. Efimova, E.M. Kildyushov, A.S. Sokolov, P.E. Khaitovich, A.V. Nedoluzhko, F.S. Sharko, B.M. Velichkovsky: Lateralization of gene expression at the frontal pole of the human brain // Psychology in Russia: State of the Art. 2017. V. 10 (3). p. 231-247.
  48. Чувакова Л.Н., Шарко Ф.С., Недолужко А.В., Полилов А.А., Прохорчук Е.Б., Скрябин К.Г., Евгеньев М.Б.: Характеристика генов hsp70 паразитического наездника Megaphragma amalphitanum (Hymenoptera: Trichogrammatidae) // Молекулярная биология. 2017. Т. 51(4). С. 615-621. doi: 10.7868/S0026898417040097.
  49. А.В. Недолужко, В.В. Кадников, А.В. Белецкий, Ф.С. Шарко, С.В. Цыганкова, А.В. Марданов, Н.В. Равин, К.Г. Скрябин: Микроорганизмы, ассоциированные с микронасекомыми Megaphragma amalphitanum и Scydosella musawasensis // Микробиология. 2017. Т. 86 (4). С. 520-522. doi: 10.7868/S0026365617040097
  50. Artemov A.V., Mugue N.S., Rastorguev S.M., Zhenilo S., Mazur A.M., S.V. Tsygankova, Boulygina E.S., Kaplun D., Nedoluzhko A.V. , Medvedeva Y.A., Prokhortchouk E.B.: Genome-wide DNA methylation profiling reveals epigenetic adaptation of stickleback to marine and freshwater conditions //Molecular Biology and Evolution.  2017. V. 34(9). p. 2203-2213. doi: 10.1093/molbev/msx156
  51. Ф.С. Шарко, А.В. Недолужко, С.М. Расторгуев, С.В. Цыганкова, Е.С. Булыгина, А.А. Полилов, Е.Б. Прохорчук, К.Г. Скрябин.: Порядок митохондриальных генов как дополнительный маркер в филогенетических исследованиях насекомых. Вавиловский журнал генетики и селекции. 2017. 21(3):368-373.
  52. Прохорчук Е.Б., Недолужко А.В., Шарко Ф.С., Цыганкова С.В., Булыгина Е.С., Расторгуев С.М., Соколов А.С., Мазур А.М., Полилов А.А., Скрябин К.Г.: Секвенирование генома и транскриптома миниатюрного перепончатокрылого Megaphragma amalphitanum (Hymenoptera: Trichocrammatidae). Вестник Московского университета. Серия 16: Биология. 2017. Т. 72. № 1. С. 35-38.
  53. Nedoluzhko A.V., Sharko F.S., Tsygankova S.V., Boulygina E.S., Sokolov A.S., Rastorguev S.M., Kadnikov V.V., Mardanov A.V., Ravin N.V., Mazur A.M., Polilov A.A., Gruzdeva N.M., Prokhortchouk E.B., Skryabin K.G.: Metagenomic analysis of microbial community of a parasitoid wasp Megaphragma amalphitanum. Genom Data. 2016 Dec 21;11:87-88.
  54. Аулов В.А., Климентов А.А., Машинистов Р.Ю., Недолужко А.В., Новиков А.М., Пойда А.А., Тертычный И.С., Теслюк А.Б., Шарко Ф.С.: Интеграция гетерогенных вычислительных инфраструктур для анализа данных геномного секвенирования. Математическая биология и биоинформатика. 2016. Т. 11. № 2. С. 205–213
  55. O.A. Shulga, A.V. Nedoluzhko, A.V. Shchennikova, N.M. Gruzdeva, A.A. Shelenkov, F.S. Sharko, A.S. Sokolov, E.S. Pantiukh, S.M. Rastorguev, E.B. Prokhortchouk, K. G. Skryabin: Profiling of microRNAs in wild type and early flowering transgenic Chrysanthemum morifolium by deep sequencing. Plant Cell, Tissue and Organ Culture (PCTOC). 2016. doi:10.1007/s11240-016-1109-z
  56. Sokolov A.S., Nedoluzhko A.V., Boulygina E.S., Tsygankova S.V., Gruzdeva N.M., Shishlov A.V.,  Kolpakova A., Rezepkin A.D., Skryabin K.G., Prokhortchouk E.B.: Six complete mitochondrial genomes from Early Bronze Age humans in the North Caucasus. Journal of Archaeological Sciences. 2016. V.73. P. 138–144
  57. Rastorguev S., Nedoluzhko A., Sharko F., Boulygina E., Sokolov A., Gruzdeva N., Skryabin K., Prokhortchouk E.: Identification of novel microRNA genes in freshwater and marine forms of the three-spined stickleback (Gasterosteus aculeatus). Molecular Ecology Resources. 2016 May 30. doi: 10.1111/1755-0998.12545.
  58. Nedoluzhko A.V., Sharko F.S., Boulygina E.S., Tsygankova S.V.,  Sokolov A.S., Mazur A.M., Polilov A.A., Prokhortchouk E.B., Skryabin K.G.: The complete mitochondrial genome of the smallest known free-living insect Scydosella musawasensis. Mitochondrial DNA Part B. V. 1(1). 2016. DOI:10.1080/23802359.2016.1149785
  59. Rastorguev S.M. , Nedoluzhko A.V., Levina M.A.,  Prokhortchouk E.B.,  Levin B.A.. Pleiotropic Effect of Thyroid Hormones on Gene Expression in Fish as Exemplified by the Blue Bream Ballerus ballerus (Cyprinidae): Results of Transcriptomic Analysis. Doklady Biochemistry and Biophysics. 2016. V.467. p. 124-127.
  60. Fedor S. Sharko, Anna A. Shapovalova, Svetlana V. Tsygankova, Anastasia V. Komova, Eugenia S. Boulygina, Anton B. Teslyuk, Pavel M. Gotovtsev, Zorigto B. Namsaraev, Tatiana V. Khijniak, Artem V. Nedoluzhko, Raif G. Vasilov: Draft Genome Sequence of “ Halomonas chromatireducens ” Strain AGD 8-3, a Haloalkaliphilic Chromate- and Selenite-Reducing Gammaproteobacterium. Genome Announcements 04/2016; 4(2):e00160-16. DOI:10.1128/genomeA.00160-16
  61. Artem V. Nedoluzhko, Eugenia S. Boulygina, Alexey A. Polilov, Fedor S. Sharko, Alexander M. Mazur, Svetlana V. Tsygankova, Alexey S. Sokolov, Egor B. Prokhortchouk, Konstantin G. Skryabin: Mitochondrial genome of Megaphragma amalphitanum (Hymenoptera: Trichogrammatidae). Mitochondrial DNA 11/2015; DOI:10.3109/19401736.2015.1101546
  62. Pablo Librado, Clio Der Sarkissian, Luca Ermini, Mikkel Schubert, Hákon Jónsson, Anders Albrechtsen, Matteo Fumagalli, Melinda A. Yang, Cristina Gamba, Andaine Seguin-Orlando, Cecilie D. Mortensen, Bent Petersen, Cindi A. Hoover, Belen Lorente-Galdos, Artem Nedoluzhko, Eugenia Boulygina, Svetlana Tsygankova, Markus Neuditschko, Vidhya Jagannathan, Catherine Thèves, Ahmed H. Alfarhan, Saleh A. Alquraishi, Khaled A. S. Al-Rasheid, Thomas Sicheritz-Ponten, Ruslan Popov, Semyon Grigoriev, Anatoly N. Alekseev, Edward M. Rubin, Molly McCue, Stefan Rieder, Tosso Leeb, Alexei Tikhonov, Eric Crubézy, Montgomery Slatkin, Tomas Marques-Bonet, Rasmus Nielsen, Eske Willerslev, Juha Kantanen, Egor Prokhortchouk, Ludovic Orlando: Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments. Proceedings of the National Academy of Sciences 11/2015; DOI:10.1073/pnas.1513696112
  63. Andaine Seguin-Orlando, Cristina Gamba, Clio Der Sarkissian, Luca Ermini, Guillaume Louvel, Eugenia Boulygina, Alexey Sokolov, Artem Nedoluzhko, Eline D. Lorenzen, Patricio Lopez, H. Gregory McDonald, Eric Scott, Alexei Tikhonov, Thomas W. Stafford, Jr, Ahmed H. Alfarhan, Saleh A. Alquraishi, Khaled A. S. Al-Rasheid, Beth Shapiro, Eske Willerslev, Egor Prokhortchouk, Ludovic Orlando: Pros and cons of methylation-based enrichment methods for ancient DNA. Scientific Reports 06/2015; 11826:11826. DOI:10.1038/srep11826
  64. Ghislaine Scelo, Yasser Riazalhosseini, Liliana Greger, Louis Letourneau, Mar Gonzàlez-Porta, Magdalena B Wozniak, Mathieu Bourgey, Patricia Harnden, Lars Egevad, Sharon M Jackson, Mehran Karimzadeh, Madeleine Arseneault, Pierre Lepage, Alexandre How-Kit, Antoine Daunay, Victor Renault, Hélène Blanché, Emmanuel Tubacher, Jeremy Sehmoun, Juris Viksna, Edgars Celms, Martins Opmanis, Andris Zarins, Naveen S Vasudev, Morag Seywright, Behnoush Abedi-Ardekani, Christine Carreira, Peter J Selby, Jon J Cartledge, Graham Byrnes, Jiri Zavadil, Jing Su, Ivana Holcatova, Antonin Brisuda, David Zaridze, Anush Moukeria, Lenka Foretova, Marie Navratilova, Dana Mates, Viorel Jinga, Artem Artemov, Artem Nedoluzhko, Alexander Mazur, Sergey Rastorguev, Eugenia Boulygina, Simon Heath, Marta Gut, Marie-Therese Bihoreau, Doris Lechner, Mario Foglio, Ivo G Gut, Konstantin Skryabin, Egor Prokhortchouk, Anne Cambon-Thomsen, Johan Rung, Guillaume Bourque, Paul Brennan, Jörg Tost, Rosamonde E Banks, Alvis Brazma, G Mark Lathrop: Variation in genomic landscape of clear cell renal cell carcinoma across Europe. Nature Communications 10/2014; 5:5135. DOI:10.1038/ncomms6135
  65. A V Nedoluzhko, E S Boulygina, A S Sokolov, S V Tsygankova, N M Gruzdeva, A D Rezepkin, E B Prokhortchouk: Analysis of the Mitochondrial Genome of a Novosvobodnaya Culture Representative using Next-Generation Sequencing and Its Relation to the Funnel Beaker Culture. Acta Naturae 08/2014; 6(2(21)):31-35.
  66. Artem V Artemov, Eugenia S Boulygina, Svetlana V Tsygankova, Artem V Nedoluzhko, Nikolay N Chekanov, Natalia M Gruzdeva, Natalia D Selezneva, Irina F Roshchina, Svetlana I Gavrilova, Boris B Velichkovsky, Konstantin G Skryabin, Egor B Prokhortchouk: Study of Alzheimer family case reveals hemochromotosis- associated HFE mutation. 07/2014; 1. DOI:10.1038/hgv.2014.4
  67. Sergey M Rastorguev, Artem V Nedoluzhko, Alexander M Mazur, Natalia M Gruzdeva, Alexander A Volkov, Anna E Barmintseva, Nikolai S Mugue, Egor B Prokhortchouk: High-throughput SNP-genotyping analysis of the relationships among Ponto-Caspian sturgeon species // Ecology and Evolution.2013. V.3(8). P.2612-2618. https://doi.org/10.1002/ece3.659. 
  68. Mardanov A.V., Babykin M.M., Beletsky A.V., Grigoriev A.I.,  Zinchenko V.V., Kadnikov V.V. , Kirpichnikov M.P., Mazur A.M.,  Nedoluzhko A.V., Novikova N.D., Prokhortchouk E.B., Ravin N.V., Skryabin K.G., Shestakov S.V.: Metagenomic Analysis of the Dynamic Changes in the Gut Microbiome of the Participants of the MARS-500 Experiment, Simulating Long Term Space Flight. Acta Naturae 03/2013; 5(3):116-125.
  69. Mardanov A.V., Bulygina E.S., Nedoluzhko A.V., Kadnikov V.V., Beletskii A.V. , Tsygankova S.V., Tikhonov A.N., Ravin N.V.,  Prokhorchuk E.B., Skryabin K.G. : Molecular analysis of the intestinal microbiome composition of mammoth and woolly rhinoceros // Doklady Biochemistry and Biophysics. 2012. V. 445(1). P. 203-206. DOI:10.1134/S1607672912040060
  70. Tikhonov A.V., Nedoluzhko A.V., Martynov V.V., Dorokhov D.B. : Study of genetic diversity and spatial structure of the wild soybean (Glycine soja Sieb. & Zucc.) population from the neighborhood of the settlement of Ekaterinovka in the south of Primorskii krai. Russian Journal of Genetics. 2011. V.44(3-3). doi:10.1134/S1022795411020177
  71. Skryabin K.G., Prokhortchouk E.B., Mazur A.M., Boulygina E.S.,  Tsygankova S.V., Nedoluzhko A.V., Rastorguev S.M., Matveev V.B., Chekanov N.N., Goranskaya D.A., Teslyuk A.B.,  Gruzdeva N.M.,  Velikhov V.E.,  Zaridze D.G., Kovalchuk M.V.: Combining Two Technologies for Full Genome Sequencing of Human // Acta Naturae. 2009. V.1(3). p. 102-107.
  72. Nedoluzhko A.V.,  Tikhonov A.V., Dorokhov D.B.: Molecular genetic analysis of wild soybean (Glycine soja Sieb. & Zucc.) population structure in anthropogenic and natural landscapes of Primorskii krai // Russian Journal of Genetics. 2008. V. 44(8). p. 944-947. DOI:10.1134/S1022795408080085
  73. Nedoluzhko A.V. , Dorokhov D.B.: Study of the biosafety of genetically modified soybean in the center of its origin and diversity in the Far East of the Russian Federation // Cytology and Genetics. 2007. V. 41(3). p. 190-198. DOI:10.3103/S0095452707030097