Мария З.
Кандидат биологических наук, генетик, биоинформатикПоследнее обновление резюме | 17.07.2022 |
Адрес | Russian Federation |
Электронная почта | Заблокировано |
В чем вы сильны?
- Developed and implemented an algorithm for CNV
interpretation, which takes into account 3 more
significant parameters than competing algorithms
(Zelenova M. A. et al. Laundering CNV data for
candidate process prioritization in brain disorders
//Molecular Cytogenetics. - 2019. - T. 12. - No. 1. - S. 1-
6.).
- Designed and maintained multiple databases
containing experimental results (up to 1000 samples;
.csv, sqlite, MS Word, depending on a project).
- Authored more than 100 articles and abstracts.
- Presented research data at various conferences, both
as a speaker and a poster presenter, more than 20
times.
- Regularly analyzed large volumes of data (filtering,
processing, interpreting) for different projects (e.g.
various brain disorders, miscarriages, heart disorders)
- Worked with third party databases (obtaining
information, including it in internal bases)
- Participated in the design, conduct, and
manuscript writing of a research dedicated to the
analysis of SARS-CoV-2 genomes.
Stack:
- Data analysis and ML: Python3 (pandas, numpy,
matplotlib, seaborn, plotly, sklearn), SQL (MySQL,
SQLite), Excel/Numbers
- Bioinformatics: genetic databases (OMIM, NCBI, UCSC
genome browser, KEGG, Gene Ontology), tools for NGS
analysis (Samtools, Bedtools, Bowtie 2, vcftools, FastQC,
Galaxy browser), tools for microarray data analysis
(ChAS, DEVA software)
- Data visualisation: Power Point / Keynote, Python3
(matplotib), Cytoscape (Genemania), string.db
- Workflow: Trello, Jira
- Languages: English BIOINFORMATICIAN (C2), German (B1)
Расскажите о себе что-нибудь еще: публикации, конференции, хобби
Hackathons: winner of a 2021 Glowbyte hackathon (tool for
analysis and aggregation of data of different structure),
winner of a 2022 leadersofdigital.ru hackathon (finding
abnormalities in databases)
Science communication: popular science blog about
genetics @dr_m.green, lectures, TV appearance, articles